LUQ Data Sets by Contact

Numeric Dataset IDsort icon Data Set Identifier Abstract Data File Structure Reference Contact Owner Duration
114 Rio Mameyes Diatoms 1998-2000

Survey expeditions of the diatoms of Puerto Rico and other Caribbean islands were conducted briefly in the late 1800's and early 1900's,. However, until now no intensive study of changes in freshwater diatom community over time has been undertaken. In conjunction with other measures of quality of water in the Rio Mameyes, i.e. pH, conductivity, temperature, nutrients, periphytic diatoms have been collected monthly for two years in an effort to detect the effects of disturbances such as hurricanes and human demands on a river ecosystem.

Bryne Bryan Completed
113 Seedling and sapling dynamics of treefall pits and undisturbed florest floor in El Verde, Puerto Rico

Seedling and sapling dynamics in a Puerto Rican rain forest were compared between forest understory and soil pits created by the uprooting of 27 trees during Hurricane Hugo. No difference in N and P levels were found in pit or forest soils under two trees with N-fixing symbionts (Inga laurina and Ormosia krugii) compared to soils under a tree species without N-fixing symbionts (Casearia arborea), but other soil variables ( Al, Fe, K) did vary by tree species.

Lawrence R. Walker Lawrence R. Walker Completed
112 Landslide Removal Experiment vegetation cover and pole touches

The purpose of this data set is to document recovery of vegetation in removal plots in landslides in the Luquillo Experimental Forest (LEF.)

Lawrence R. Walker Lawrence R. Walker Completed
111 Litterfall in tabonuco (subtropical wet) forest in the Luquillo Experimental Forest, Puerto Rico (MRCE Litterfall data)

Treatments common to both sites are quarterly fertilization (macro- and micronutrients) and unmanipulated. At El Verde, a third set of plots was subject to a one time removal of litter and woody debris generated by Hurricane Hugo (September 1989).

Alonso Ramirez Alonso Ramirez
Long-Term
Ongoing
110 Spatial Variation of Soil Carbon, Nitrogen and Phosphorus in the Luquillo Experimental Forest (LEF) (LEF_SOIL_CNP)

Hongqing Wang, a Ph.D graduate student of SUNY-ESF, with the help of many others, took soil samples in 119 locations over the entire Luquillo Experimental Forest (LEF) during the summer of 1998 and 1999. Soil organic carbon, total nitrogen and acid-extractable phosphorus were measured in the laboratory of SUNY-ESF; soil moisture and bulk density were measured at the laboratory of the El Verde Station of UPR. The geodetic coordinates (Lat., Lon.) and elevation of each sampling location were determined using a Global Positioning System (GPS Pathfinder Basic Receivers, Trimble Navigation Ltd.) in the field. Meanwhile, slope angle, aspect and topographic features (Ridge, slope I (<35 deg.), slope II (>=35 deg.), valleys) were also measured and observed in the field.

LEF_SOIL_CNP Charles A.S. Hall Charles A.S. Hall Completed
109 Rio Icacos hyporheic and riparian chemistry

Hydrologic and chemical characteristics were determined for both riparian and hyporheic subsurface flow along a 100-m reach of a sandy-bottom tributary of the Rio Icacos in the Luquillo Experimental Forest, Puerto Rico. Hydrologic data (vertical hydraulic gradient and hydraulic conductivity of streambed sediments) and the topographic and morphological features of the watershed indicated diffuse inputs of groundwater from the near-stream riparian zone along this site. Cumulative groundwater discharge, determined by tracer dilution techniques, was ~1.5 L/s or 10% of the total stream discharge. Spatial heterogeneity in hydrologic and chemical properties of riparian and hyporheic sediments was large. Hydraulic conductivity explained much of the variation in NH4-N and dissolved organic carbon (DOC) concentrations, with highest concentrations in sites having low conductivity. A mass-balance approach was used to examine the influence of the near-stream zone on nutrient transport and retention. Outwelling riparian groundwater had the potential to increase stream N concentrations by up to 84% and DOC concentrations by up to 38% along our 100-m reach. Because stream concentrations were constant downstream despite this input, we conclude that significant N and C retention or loss were occurring in the near-stream zone. Lotic ecosystems and their associated riparian groundwater can have a quantitatively significant impact on the nutrient budgets of tropical headwater catchments.

Hyporheic chemistry William H. McDowell Completed
108 Patterns in soil and physical properties of the Bisley Watersheds 1 and 2 (Big Dig 1988, Big Dig 1990)

(1) Exchangeable cation concentrations were measured using different soil extracting procedures (fresh soil and air-dried and ground soil) to establish a range of nutrient availability in the soil, and to determine the relationship between different, but commonly used laboratory protocols.

(2) Soils extracted using fresh soils generally yielded significantly lower exchangeable Ca , Mg, and K concentrations than soils which were dried and ground prior to extraction. Soil nutrients generally decreased with depth in the soil.

(3) Several soil properties varied predictably across the landscape and could be viewed in the context of a simple catena model. In the surface soils, exchangeable base cation concentrations and pH decreased along a gradient from ridge tops to riparian valleys, while soil organic matter, exchangeable Fe and acidity increased along this gradient. On the ridges, N,P, and K were positively correlated with soil organic matter; on slopes, N and P were positively correlated with organic matter, and Ca, Kg, and pH were negatively correlated with exchangeable Fe.

(4) Soil nutrient availability in the upper catena appears to be primarily controlled by biotic processes, particularly the accumulation of organic matter. Periodic flooding and impeded drainage in the lower catena resulted in a more heterogeneous environment. Drying and grinding the soil prior to extraction had a greater impact on exchangeable cations from the upper catena than in the valley positions, probably due to greater soil organic matter content. See Silver, W.L., F.N. Scatena, A.H. Johnson, T.G. Siccama, and M.J. Sanchez. 1994. Nutrient availability in a montane wet tropical forest in Puerto Rico: spatial patterns and methodological considerations. Plant and Soil 164:129-145.

Whendee Silver Whendee Silver Completed
107 El Verde Grid invertebrate data

The data set consists of 13 files: (1) abundance data for the walking stick, Lamponius portoricensis, (2) estimates of abundance (Minimum Number Known Alive) for 17 species of terrestrial snails, and (3) 11 files containing data on size and mark-recapture estimates of population size for the snails Caracolus caracolla and Nenia tridens from Wet Season 1995 to Wet Season 2000. Note: MNKA estimates are not always identical to the number of individuals indicated in the Mark-Recapture data, because some individuals (e.g., those that were lost before being marked) had to be excluded from calculations for Mark-Recapture estimates of abundance.

Stephen Cox
Long-Term
Ongoing
106 Effects of biotic (shrimp) and abiotic (discharge) factors on the depositional environment quantified in a montane stream in Puerto Rico. (Shrimp/Algae/Can J. Fish Aquat. Sci. (1994))

Effects of biotic (shrimp) and abiotic (discharge) factors on the depositional environment were quantified in a montane stream in Puerto Rico. Electricity was used experimentally to exclude large (approximately >1cm in length) biota without artificially increasing sedimentation as in cage enclosure/exclosure experiments in stream systems. Shrimp (>1cm in length) were excluded from substrata by semicircular fence hooked up to battery-powered fence chargers which emitted continuous pulses of electricity. Unelectrified control substrata had natural high densities of atyid shrimp. Significantly greater masses of total sediment, fine and large organic particles, and algal biovolume occurred in shrimp exclusion treatments relative to controls. Shrimp exclusion treatments experienced slow and steady accumulation of sediments under base flow conditions and a large stepwise increase in sediment following a storm. No measurable sediment accrued in the presence of natural densities of shrimp under base flow conditions. Shrimp rapidly removed sediments that accrued during the storm (440-620 g*m2 dry mass-1), decreasing sediment mass in control treatments to near prestorm levels (5-13 g*m2 dry mass-1) within 30 h. Atyid shrimp can significantly affect the accumulation of organic and inorganic materials on rock substrata in stream pools between high-discharge events.

Catherine Pringle Catherine Pringle Completed
105 Enclosure/exclosure experiments in a montane Puerto Rican stream examining direct and indirect effects of two dominant taxa of atyid (Atyidae) shrimp, Atya lanipes Holthius and Xiphocaris elongata Guerin-Meneville (Shrimp/ Algae/ Oecologia (1993))

Freshwater shrimp dominate the faunal biomass of many tropical headwater streams: however, their role in community organization is unclear. Enclosure/exclosure experiments in a montane Puerto Rican stream examined direct and indirect effects of two dominant taxa of atyid (Atyidae) shrimp, Atya lanipes Holthius and Xiphocaris elongata Guerin-Meneville. Both shrimp taxa caused significant reductions in sediment cover on rock substrata, reducing sedimentation and enhancing algal biovolume on clay tiles in cages. When tiles incubated in shrimp exclosures for 2 wks were placed outside of cages, atyid shrimp removed 100% of sediment cover within a 30 min. observation period. Atyid shrimp appear to play an important role in stream recovery after high discharge events in rapidly removing sediments and detritus deposited on benthic substrata in pools. We evaluated the mechanism by which A. lanipes influences algae and benthic insects by comparing patterns of algal biomass, taxonomic composition and shrimp-presence treatments both with and without manual sediment removal. The shrimp exclusion treatment without manual sediment removal had significantly lower algal biomass and greater sedimentation than all other treatments. The treatment in which shrimp were excluded but sediment was manually removed, however, accrued almost the same algal biovolume as the shrimp enclosure treatment, supporting the hypothesis that sediment removal enhances the biovolume of understory algal taxa. Algal community composition was similar between stream bottom bedrock exposed to natural densities of shrimp and all experimental treatments for both Atya and Xiphocaris: a diatom community strongly dominated (78-95%) by the adnate taxon, Achnanthes lanceolata Breb ex. Kutz. Atyid shrimp are important in determining the distribution and abundance of benthic insects through both direct and indirect effects. Sessile, retreat-building chironomid larvae (Chironomidae: Diptera) are negatively affected by both A. lanipes and X.elongata, through direct removal by foraging activities and/or indirectly through depression of sediment resources available to larvae for the construction of retreats. In contrast, the mobile grazer, Cleodes maculipes (Baetidae: Ephemeroptera) was not adversely affected and atyid shrimp have the potential to exert positive indirect effects on this taxon by facilitating its exploitation of algal resources and/or through enhancement of understory algal food resources through sediment removal.

Catherine Pringle Catherine Pringle Completed
104 Experimentally manipulated biota over a 30-40d period in two streams with distinctly different macrobiotic (Shrimp/Organic Matter/Ecology (1999))

Here we test the hypothesis that differences in macrobiotic assemblages can lead to differences in the quantity and quality of organic matter in benthic depositional environments among streams in montane Puerto Rico. We experimentally manipulated biota over a 30-40d period in two streams with distinctly different macrobiotic assemblages: one characterized by high densities of omnivorous shrimps (Decapoda: Atyidae and Xiphocarididae) and no predaceous fishes. To incorporate the natural hydrologic regime and to avoid confounding artifacts associated with cage enclosure/exclosure (e.g., high sedimentation), we used electricity as a mechanism for experimental exclusion, in situ. In each stream, shrimps and/or fishes were excluded from specific areas of rock substrata in four pools using electric "fences" attached to solar-powered fence chargers. In the stream lacking predaceous fishes (Sonadora), the unelectrified control treatment was almost exclusively dominated by high densities of omnivorous shrimps that constantly ingested fine particulate material from rock surfaces. Consequently, the control had significantly lower levels of inorganic sediments, organic material, carbon and nitrogen than the exclusion treatment, as well as less variability in these parameters. Tenfold more organic material (as ash-free dry mass, AFDM) and fivefold more nitrogen accrued in shrimp exclosures (10.6 g AFDM/m2, 0.2 g N/m2) than in controls (1.1 g AFDM/m2, 0.04 g N/m2). By reducing th quantity of fine particulate organic material and associated nitrogen in benthic environments, omnivorous shrimps potentially affect the the supply of this important resource to other trophic levels. The small amount of fine particulate organic matter (FPOM) that remained in control treatments (composed of sparse algal cells0 was of higher quality than that in shrimp exclosures. This is evidenced by the significantly lower carbon-to-nitrogen (C/N) ratio (an indicator of food quality, with relatively low C/N indicating higher food quality) in the control relative to the shrimp exclosure treatment. In contrast, the stream with predaceous fishes (Bisley) was characterized by very low numbers of shrimps, and macrobiota had no significant effect on benthic sediments, organic matter, C, N, and C/N. All parameters were highly variable through time, with levels and ranges in variability similar to the shrimp exclusion treatment in the Sonadora. Our experimental results are consistent with findings of an independent survey of six streams in four different drainages. Four streams that had an abundance of omnivorous shrimps but lacked predaceous fishes, had extremely low levels of fine benthic organic and inorganic material. In contrast, two streams that had low densities of shrimps and contained predaceous fishes had significantly higher levels. Results show a strong linkage between species and ecosystem characteristics: interstream differences in the quantity and quality of fine benthic organic matter resources were determined by the nature of the macrobiotic assemblage. Furthermore, patterns in the distribution of shrimp assemblages reflected landscape patterns in the benthic depositional environment among streams.

Catherine Pringle Catherine Pringle Completed
103 Effect of plant density and light availability on leaf damage in Manilkara bidentata

Variation in herbivory is often associated with plant density and light environment. To determine the effect of these variables on herbivory we studied leaf production and herbivory on saplings, juveniles and adults of Manilkara bidentata (Sapotaceae) in the Luquillo Experimental Forest (LEF), Puerto Rico. The major herbivore of M. bidentata is microlepidoptera leaf miner (Acrocercopssp.; Gracillariidae). To determine the effect of plant density on herbivory, 24 - 20 x 20 m plots were established and the density of saplings, juveniles and adults were determined. Leaf production, herbivory and growth were measured on all saplings in the plots. In addition, plant density was determined in 8-20 x 20 m plots surrounding the 24 focal plots. The effect of light environment was determined by comparing leaf phenology, leaf quality and herbivory in the vertical and horizontal profile. Sapling density in 60 x 60 m plots was associated with increased levels of herbivory. In the vertical profile, leaf production was continuous in the canopy and synchronous for juveniles and saplings and herbivory increased from the canopy (1.3%) towards the understory (35.6%). In the horizontal profile leaf production was related with the light environmen. Saplings in low light environment produced leaves in June, while plants in gaps had a broader peak of leaf production. Differences in leaf phenology did not result in differences in herbivory possibly because there was high variation in herbivory among leaves. Although many saplings lost more than 80% of new leaf area, there was no detectable effect on plant growth.

Leaf damage in Manilkara bidentata Mitchell Aide Maria del Pilar Angulo Completed
102 Leaf miners (Acrocercops sp.) larvae performance on young leaves of Manilkara bidentata

Manilkara bidentata is attacked by a specialist leaf miner(Acrocercops sp.(microlepidoptera:gracillariidae).  More than one larvae can be found per mine within a leaf. The purposes of this study is to determine the effect of group feeding for this species since larval density within a leaf vary from 1-14 larvae per mine (Angulo-Sandoval personal observation). This variation allows to determine the effect of larval density on the amount of leaf damage, larval survivorship and larval growth. Leaves with mines varied in area from 10 to 224 cm2 (mean = 85.7 cm2) and the number of larvae per leaf ranged from 1 to 14 (mean = 5.7 larvae/mine). There was no relation between the size of the leaf and the number of larvae found within the leaf.

There was a relationship between the number of larvae in a blotch mine and amount of damaged tissue. Herbivory increases from approximately 10% for one larva per leaf to 50% in leaves with eight larvae. In leaves with more than eight larvae, herbivory decreased . There was an effect of initial larval density on percent larval survivorship.Survivorship was high (70%) in leaves with one to three larvae. In intermediate density (4-8 larvae per mine) 50% of larvae survived and in high densities (9 - 14 larvae per mine), only 22% survived. Even though there was a decrease in larvae number in high densities, the final number of larvae remained higher, compared with low or intermediate densities. A linear relationship was found between number of larvae present in the leaf and the time it took the larvae to complete their larval stage. Larvae in high density (> 9 larvae per mine) tended to develop faster (3-8 days) than larvae in low densities (5 - 10 days). Larval size upon emergence ranged from 8 to 12 mm (mean= 9.27) but there was no effect of larval density on the final larval size. The total number of surviving larvae varied according to the initial larval number and was highest in mines with eight individuals of which on average 4.7 survived. The number of surviving larvae was less than three for all other clutch sizes. Even though eight larvae appears to be the optimum clutch size, most females produced smaller clutches (4- 6 larvae per leaf).All larvae that emerged built a cocoon and 90% emerged as butterflies.

Leaf miners (Acrocercops sp.)larvae survivorship on young leaves of Manilkara bidentata Mitchell Aide Maria del Pilar Angulo Completed
101 Ecuador old fields permanent plot vegetation sampling

Permanent plot data is expected to show these temporal patterns: (1) rapid increases in percent cover and tree stem density, and (2) rapid turnover from early to late successional plant species. Plant-plant competition should show quick increases in intensity with native grass species and exotics as top competitors. These may lead to exclusion of some trees common after landslide disturbance. Spatial patterns of invading trees should include edge effects due to dispersal limitation with clumping of bird-dispersed species before the first five years after cow exclusion. Because of intact soil and low vegetation trees should grow, as measured by biomass(productivity), height, and basal diameter increases, significantly faster compared to colonization of landslides.

Randall W. Myster Randall W. Myster
Long-Term
Ongoing
100 El Verde Coffee Plantation permanent plot vegetation sampling

Permanent plot data is expected to show (1) rapid increases in percent cover and tree stem density, and (2) rapid turnover from early to late successional plant species. Plant-plant competition indices should show quick increases in intensity with exotics as top competitors which may lead to exclusion of some trees common after landslide and pasture disturbance. Spatial patterns of invading trees should include edge effects due to dispersal limitation with clumping of bird-dispersed species before the first five years. Because of increased nitrogen levels due to plantings of Inga Sp. with coffee, trees should grow, as measured by biomass (productivity), height and basal diameter increases, significantly faster compared to landslide.

Randall W. Myster Randall W. Myster Completed
99 Herbivory of eight common species at El Verde from 1994 to 1996

In seasonal and aseasonal tropical forests, leaf production is often highly synchronous, concentrating herbivore resources in only a few months. As a result levels of herbivory on young leaves can vary throughout the year. To determine the importance of food availability on herbivory, leaf phenology and leaf damage were studied in an aseasonal forest, Luquillo Experimental Forest (LEF) in Puerto Rico. Leaf production was associated with an increase in light availability but leaf damage was relatively constant throughout the year. Leaf phenology and leaf damage was compared between LEF and a seasonal forest, Barro Colorado Island (BCI) Panamá. In BCI leaf production was associated with increases in water availability and leaf damage was significantly higher on leaves produced after the peak in leaf production. Leaf damage was significantly lower in LEF in comparison with BCI. Differences in the trophic structure between the two forests may explain the differences in levels of leaf damage. The density of frogs and lizards in LEF was approximately an order of magnitude greater than in BCI and these predators may limit the populations of herbivores and reduce leaf damage levels.

Mitchell Aide Maria del Pilar Angulo Completed
98 Soil organic matter dynamics in the tabonuco forest, a plantation and a secondary forest in Guzman

In this project we try to find out the relationship between the primary production and the soil organic carbon fractions.

Xiaoming Zou Xiaoming Zou Completed
97 Sabana pasture permanent plot vegetation sampling

Permanent plot data is expected to show these temporal patterns: (1) rapid increases in percent cover and tree stem density, and (2) rapid turnover from early to late successional plant species. Plant-plant competition should show quick increases in intensity with native grass species and exotic as top competitors. These may lead to exclusion of some trees common after landslide disturbance. Spatial patterns of invading trees should include edge effects due to dispersal limitation with clumping of bird-dispersed species before the first five years after cow exclusion. Because of intact soil and low vegetation in the pasture trees should grow, as measured by biomass(productivity), height, and basal diameter increases, significantly faster compared to colonization of landslides.

Randall W. Myster Randall W. Myster Completed
96 Canopy invertebrate responses to Hurricane Hugo at several El Verde plots- LUQINVERT

Five tree species in 1991, six during 1992-1995, were selected to represent early and late successional forests at El Verde. These trees were sampled in both gap and non-gap plots resulting from Hurricane Hugo.

El Verde Canopy Arthropods data Timothy D. Schowalter Timothy D. Schowalter
Long-Term
Completed
95 Litterfall along topographic gradients at lower Bisley

Litterfall (fine and coarse) due to Hurricane Hugo and subsequent fine annual litterfall inputs (1, 2 and 5 yr after Hugo) were determined for two sites (El Verde and Bisley) in the Luquillo Experimental Forest in Puerto Rico. Litter transfers into streams, riparian and upslope areas were determined within each catchment. The recovery rate of aboveground fine litterfall (leaf, fine wood <1 cm diameter, and other miscellaneous inputs) to predisturbance levels were determined 1, 2, and 5 yr after Hurricane Hugo. The amount of total litter transfers and their individual components into the riparian and upslope areas due to Hurricane Hugo varied significantly by catchments within the Luquillo Experimental Forest. At El Verde, 26-39%, 31- 35%, 14-35% and 7-12% of the total litter transfers were contributed by leaf litter, fine wood, coarse wood and fine roots, respectively. At Bisley, 28-31%, 26-29%, 33-35% and 8-10% of the litter transfers were contributed by the same categories. Differential decay rates contributed to the relative importance of fine and coarse litter inputs. The recovery of fine aboveground litterfall to pre-hurricane levels after 5 yr varied by topographic location (streams had the slowest recovery, upslope areas the highest) and catchment (El Verde: 55-77%; Bisley: 39-82% of pre-hurricane values).

Completed