Luquillo Data Sets By Insertion Order

Numeric Dataset IDsort icon Data Set Identifier Abstract Owner
139 Indirect upstream effects of dams: consequences of migratory consumer extirpation in Puerto Rico

Large dams degrade the integrity of a wide variety of ecosystems, yet direct downstream effects of dams have received the most attention from ecosystem managers and researchers. We investigated indirect upstream effects of dams resulting from decimation of migratory freshwater shrimp and fish populations in Puerto Rico, USA, in both high- and low-gradient streams. In high-gradient streams above large dams, native shrimps and fishes were extremely rare, whereas similar sites without large dams had high abundances of native consumers. Losses of native fauna above dams dramatically altered their basal food resources and assemblages of invertebrate competitors and prey. Compared to pools in high-gradient streams with no large dams, pool epilithon above dams had 9 times more algal biomass, 20 times more fine benthic organic matter (FBOM), 65 times more fine benthic inorganic matter (FBIM), 28 times more carbon (C), 19 times more nitrogen (N), and 4 times more non-decapod invertebrate biomass. High-gradient riffles upstream from large dams had 5 times more FBIM than did undammed riffles but showed no difference in algal abundance, FBOM, or non-decapod invertebrate biomass. For epilithon of low-gradient streams, differences in basal resources between pools above large dams vs. without large dams were considerably smaller in magnitude than those observed for pools in high-gradient sites. These results match previous stream experiments in which the strength of native shrimp and fish effects increased with stream gradient. Our results demonstrate that dams can indirectly affect upstream free-flowing reaches by eliminating strong top-down effects of consumers. Migratory omnivorous shrimps and fishes occur throughout the tropics, and the consequences of their declines upstream from many tropical dams are likely to be similar to those in Puerto Rico. Thus, ecological effects of migratory fauna loss upstream from dams encompass a wider variety of species interactions and biomes than the bottom-up effects (i.e., elimination of salmonid nutrient subsidies) recognized for northern temperate systems.

Effie A. Greathouse
140 Neritina snails upstream migrations

This data set includes N. virginea densities and sizes from two channels in lower Rio Mameyes under PR Route 3 bridge during the upstream migration season Aug-Dec 2000. Microhabitat use (near-bed water velocities and depth) within both channels is also included. Massive migrations in long trails occurring on the sloped concrete embankment of the main channel were also documented during 99 weeks. Individual size from migratory aggregations was measured during selected dates.

Juan Felipe Blanco
141 Neritina snails hierarchical distribution

This data set includes N. virginea densities and sizes relative to streambed substrate type, water depth, and habitat type in a low land reach in Río Mameyes near PR Route 3 bridge, and presence and inland extent of distribution of in 32 coastal rivers around the island. Hydrologic and water chemistry variables are reported as predictors of snail distribution at regional and stream-network scales.

Juan Felipe Blanco
142 Does the River Continuum Concept apply on a tropical island? Longitudinal variation in a Puerto Rican stream

We examined whether a tropical stream in Puerto Rico matched predictions of the River Continuum Concept (RCC) for macroinvertebrate functional feeding groups (FFGs). Sampling sites for macroinvertebrates, basal resources, and fishes ranged from headwaters to within 2.5 km of the fourth-order estuary. In a comparison to a model temperate system where RCC predictions generally held, we used catchment area as a measure of stream size in order to examine truncated RCC predictions (i.e., cut off to correspond to the largest stream size sampled in Puerto Rico). Despite dominance of generalist freshwater shrimps, which use more than one feeding mode, RCC predictions held for scrapers, shredders, and predators. Collector-filterers showed a trend opposite that predicted by the RCC, but patterns in basal resources suggest that this is consistent with the central RCC theme: longitudinal distributions of FFGs follow longitudinal patterns in basal resources. Alternatively, the filterer pattern may be explained by fish predation affecting distributions of filter-feeding shrimp. Our results indicate that the RCC generally applies to running waters on tropical islands. However, additional theoretical and field studies across a broad array of stream types should examine whether the RCC needs to be refined to reflect the potential influence of top-down trophic controls on FFG distributions.

Effie A. Greathouse
143 Canopy Trimming Experiment (CTE) plant seedling measurements

Seedlings were measured before and after treatments to determine how alterations in canopy openness and detritus affect seedling densities and life histories (growth, mortality, recruitment). It was predicted that plots experiencing canopy openness with detritus removed would have the quickest increase in seedlings (recruitment and growth), especially of early successional (light demanding) species, such as Cecropia. Seedlings in plots that received no canopy manipulation but had detritus deposited is predicted to have near-total mortality initially (low light and high physical inhibition due to detritus). Treatment plots experiencing both canopy manipulation and addition of detritus would initially experience near-total mortality, with some light demanding seedlings establishing and growing through detritus with time.

Nicholas Brokaw
144 Canopy Trimming Experiment (CTE) plants greater than 1 centimeter diameter at breast height (DBH)

Plant diameters and growth measurements were taken both before and after treatments to determine how alterations in canopy openness and detritus affect measures of growth, mortality, and production. Both types of trimmed plots are predicted to have relatively quick evidence of re-sprouting (1-3 months; based on Hurricane Hugo studies), especially palms. Because essentially complete defoliation to the canopy took place in the trim plots, the large stems that were trimmed should experience delayed growth and higher mortality than those in non-trimmed plots. The understory vegetation, or otherwise those that were not trimmed (i.e., stems <10cm at dbh) should experience increased growth in both trim plots as a result of increased light. Some nutrient immobilization may occur in the detritus addition plots, but this is predicted to affect belowground processes most. Little influence on aboveground processes from detritus addition might occur and cause some stunted growth rates of stems.

Nicholas Brokaw
145 Canopy Trimming Experiment (CTE) Litter decomposition and Connectivity basket data

This experiment was designed to decouple the effects of canopy opening from those of increased detrital inputs on rates of detrital processing and resultant community and ecosystem processes. In a study initiated after massive inputs of organic matter from Hurricane Georges in 1998, the forest floor returned to prehurricane values very quickly, within 2-10 months (Ostertag et al. 2003). However, it was unclear to what extent this homeostasis was caused by increased rates of decomposition. Furthermore, if accelerated decomposition was implicated in rapid recovery, the relative contributions of environmental and resource changes wrought by canopy opening versus green leaf deposition on the forest floor were unclear because these factors are confounded in hurricane damage. A full factorial design was therefore used to tease apart the separate and combined effects of simulated storm damage on rates of mass loss in pre-weighed senesced and green litter cohorts inserted into litter decomposition baskets following application of canopy trimming and debris deposition treatments. Natural litter cohorts (i.e., organic forest floor material and subsequent natural litterfall separated into 3-month cohorts) were also weighed when replicate baskets were harvested at approximately 3-month intervals. In addition to obtaining mass and percent moisture of litter cohorts, the extent of fungal connections between litter cohorts was quantified. Fungal connections between partly decomposed and fresh leaf litter have been shown to be important in importation of phosphorus (the most limiting major nutrient in decomposition of tabonuco forest litter) into the freshly fallen leaves in order to rapidly build fungal biomass and associated acceleration of decomposition (Lodge 1993, 1996). The thickest of these fungal colonization & translocation organs (rhizomorphs, cords and hyphal strands) are primarily basidiomycete fungi, which have an almost unique capacity to cause white-rot by breaking down lignin in low-quality litter. A few white-rot basidiomycetes produce finer connections comprised of diffuse wefts of hyphae (e.g., Marasmius leoninus and related species), but the majority may represent ascomycetes and water molds that lack enzyme systems for breaking down lignin. White-rot basidiomycetes were shown in separate experiments to accelerate rates of decomposition of tabonuco leaves (Dacryodes excelsa) by 15% to 20% (Santana et al. 2005; Lodge et al. 2008), so any changes in fungal connectivity by basidiomycete fungi in response to the treatments should be related to nutrient exchanges between litter cohorts and changes in rates of mass loss.

Litterbaskets are used to study decomposition and nutrient cycling questions, and are often a better for understanding interactions between different litter cohorts than are leaf decomposition bags. We know from previous work here and elsewhere that: 1) basidiomycete fungi rapidly colonize freshly fallen litter (within the first 3 weeks of litterfall) from partly decomposed litter on the forest floor using rhizomorphs and cords (Lodge & Asbury 1988); 2) these fungal root-like structures transport nutrients from the old food base in order to build their biomass in the freshly fallen leaves, and are capable of tripling the phosphorus content in a senesced tabonuco leaf as indicated using radioactive phosphorus tracer in microcosm experiments (Lodge 1993; 1996); and 3) basidiomycete colonization accelerates leaf decomposition in the LEF (Lodge et al. 2008). Fungal translocation of nutrients is probably responsible for the increase in total CONTENT of N and P in leaf litter above 100% in El Verde (as in Zou et al.) and elsewhere in the tropics within 3-6 weeks of leaf fall (see Lodge 1993). In contrast, temperate forest floor litter is not usually colonized by basidiomycete fungi from the forest floor until 9-15 months after litterfall. Translocation of phosphorus into tropical litter with low phosphorus concentrations likely contributes to accelerated rates of leaf decomposition associated with basidiomycete colonization in tabonuco forest (Lodge et al. 2008), but the enzymatic capacity of basidiomycete to degrade lignin is a contributing factor (Santana et al. 2005).

Previous research in temperate forests shows a positive effect of increased litter depth on colonization by basidiomycete fungi. Unpublished data of Lodge & Asbury showed that drying of the litter layer reduced or eliminated basdiomycete colonization, while Lodge & Cantrell (1995) showed disappearance of some basidiomycete colonies in canopy gaps on ridges at El Verde after hurricane Hugo, or replacement of drought-sensitive strong nutrient translocators (i.e., Collybia johnstonii) with more drought tolerant species that translocated less P32. There were no previous data on effects of litter depth on basidiomycete fungi from tropical forests. We knew from studies after Hurricane Georges that 1. forest floor mass in secondary forest returned to pre-hurricane levels in about a year (Ostertag, Silver & Scatena?), but we did not know whether this was due to accelerated decomposition or reduced litter inputs after the storm. Thus, it was not really clear what mechanisms were involved in control of forest floor decomposition following hurricane disturbance.

This litterbasket decomposition experiment was designed to mimic as closely as possible post-hurricane conditions in order to follow mass loss and nutrient content of specific litter cohorts. To this end, a layer of SURFACE AIR-DRIED tabonuco leaves was placed between two screens on top of the existing forest floor layer in the litterbaskets (on the ground). In debris-addition plots, green leaves of Dacryodes, Manilkara and Sloanea IN HURRICANE AMOUNTS (as determined in Lodge et al. 1991) were added on top of the senesced litter layer screen after the canopy manipulations were completed in the CTE plots. Additional cohorts of litterfall were demarcated using screens added to remaining baskets when these were harvested ca. quarterly.

So far, we know that 1) canopy opening inhibited fungal connectivity between litter cohorts (mostly basidiomycete fungi, but the highest counts may be from diffuse hyphal connections by ascomycetes and water molds); 2) addition of green litter buffered the layers below from drying, mostly compensating for the effects of canopy opening; 3) fungal connectivity to the weighed layer of senesced tabonuco leaves was positively and significantly correlated with rates of leaf decomposition; 4) litter decomposition rates were higher than in dried leaf litter in a litterbag experiment in the CTE (González et al, unpublished), as in previous unpublished comparisons of dried versus undried litter; 5) but despite this, forest floor mass had not returned to pre-hurricane levels 1.5 years after CTE initiation. The data of Cantrell and Ortíz (lterdb165) on microbial composition in the litter cohorts from these baskets used methods that cannot distinguish basidiomycetes from other fungi. The results, however, suggest that colonization by basidiomycetes colonize accelerates the rate of early leaf decomposition and changes the trajectory of community succession. Nutrient analyses to determine if increases followed by decreases in inorganic nutrient pools, especially phosphorus, are associated with changes in patterns of fungal connectivity between the litter cohorts, and whether cohorts with low connectivity at the beginning have net losses rather than net gains in N & P stores.

Jean Lodge
146 Canopy Trimming Experiment (CTE) Fern surveys

Changes in fern diversity and abundance were monitored prior to and during the Canopy Trimming Experiment (CTE). The abundance of all terrestrial fern species on the CTE plots is recorded for each subplot at annual intervals in January. The fern abundance and diversity changes in response to the block locations, treatments and other experiments conducted on subplots will be evaluated as the experiment proceeds. All surveys are done by Joanne Sharpe alone unless otherwise noted in the Comments. Only Block B was surveyed in January 2005 as other blocks had only partially been manipulated. Note that Variable abbreviations for fields common to all CTE data are in CAPS.

Joanne Sharpe
147 Meteorological data from several climate stations in the northeast section of the Luquillo Experimental Forest

Electronic sensors are placed at the field location to support other activities. Data set includes measurementes from several climate stations in the northeast section of the Luquillo Experimental Forest. These stations are surround the Bisley Experimental watersheds and the Sabana Field Station that are operated by the USFS and the USGS.

Grizelle Gonzalez
148 Bisley rainfall and throughfall, and chemistry of rainfall and throughfall

Rainfall and throughfall are collected weekly at the Bisley LEF site. These data sets begin March 1988 and ends December 2003.

Rain and throughfall samples are the total catch for the week, and are exposed to field conditions for that time. No event sampling is conducted on a routine basis. Rainfall Collected in Bisley (RCB) are bulk or always-open collectors that receive dry deposition by sedimentation.

All samples are measured for pH and conductivity, and then filtered (pre-combusted Whatman GF/F glass fiber filter) prior to further analysis. From 1983-1994 samples were cooled and returned to the San Juan chemistry laboratory for analysis. During those years, samples for NH4 and NO3 analyses were refrigerated continuously until analysis. Sub samples for NH4 analysis were also preserved with 1 molar HCl. From 1994 on, samples for NH4 and NO3 were frozen until analysis, were not acidified, and all analyses were conducted at the University of New Hampshire.

Nutrient fluxes in rainfall and throughfall were measured weekly in a mature subtropical wet forest in NE Puerto Rico over a 15-year period that included the effects of five hurricanes and several prolonged droughts. Annual inputs of K, Ca, Mg, Cl, Na, and SO4-S are similar to those reported from other marine-influenced tropical forests. Rainfall input of nitrogen is comparatively low and reflects the relative isolation of the air shed. Mean annual rainfall and throughfall were 3482 and 2131 mm yr-1 respectively. On average, rainfall, throughfall, rainfall pH, and rainfall flux NH4-N and NO3-N had small but significant decreases throughout the study period. More nutrients fluxes had seasonal differences in rainfall (6 out of 12) than throughfall (4 out of 12). All volume weighted enrichment ratios calculated for the 15-year period were greater than one. However, median weekly enrichment ratios were less than 1 for sea salts and dissolved organic carbon and between 1 and 2 for Mg, Ca, SiO2 and SO4-S. In contrast, median weekly enrichment ratios were greater than 10 for NH4-N, PO4-P, and K and reflect biological enrichment within the canopy. Droughts reduced enrichment ratios of cations and sea-salts, but increased enrichment ratios for NH4-N, PO4-P and K. In the weeks following hurricanes relative throughfall tends to be higher and enrichment ratios tend to be lower. These long-term observations indicate that physical and biological processes associated with water passing through the canopy act to buffer internal nutrient cycles from inter-annual, and seasonal variations in rainfall inputs.

Grizelle Gonzalez
149 Effects of a tropical stream poisoning: do they reflect effects of small-scale experiments?

Small-scale experiments in tropical streams have suggested that freshwater shrimps play a critical role in determining the quality and quantity of benthic organic matter and overall nutrient dynamics. We quantified the effects of a whole-reach shrimp poisoning event in the Sonadora, a second-order stream draining the Luquillo Experimental Forest in northeastern Puerto Rico. The illegal poisoning (for shrimp harvest) caused massive mortality of shrimps and aquatic insects. Atyid and xiphocaridid shrimp abundances in pools of the poisoned reach were reduced by ~95%, relative to abundances in an upstream reference reach. A survey of poisoned vs. reference pools, combined with a manipulative experiment (in which atyid and xiphocaridid shrimps were added to 3 poisoned pools), showed that reduced shrimp abundances due to the poisoning had strong impacts on benthic resources. The benthos of poisoned pools, where shrimp abundances were reduced, had 4 times more chlorophyll a, 6 times more algal biovolume, 4 times more fine particulate organic matter, 14 times more fine particulate inorganic matter, 5 times more carbon, and 4 times more nitrogen than did the benthos of pools in the reference reach. These increases in benthic resources were consistent with increases in algae, organic/inorganic matter, and nutrients in previous small-scale shrimp exclusion experiments conducted in the study river and tributaries. Effects of shrimp poisoning on the benthos varied by habitat, with riffles showing fewer significant differences than did pools. Compared to reference riffles, poisoned riffles had higher standing stocks of fine particulate inorganic matter, nitrogen, and biovolume of filamentous algae, and lower epilithic C:N ratios. Overall, previous small-scale exclusion experiments were highly predictive of the direction of effects due to large-scale shrimp removal by poisoning. Our study provides a tropical data set to add to the short list of stream studies that examine the predictive power of small-scale experiments for larger scales.

Catherine Pringle
150 Pattern morphology for frogs captured at 9 locations in northeastern Puerto Rico over a 25-year period from 1978 to 2002

We recorded the pattern morph for 9,950 frogs captured at 9 locations in northeastern Puerto Rico over a 25-year period from 1978 - 2002. Data revealed 21 distinct pattern morphs including a variety of stripes, bars, and spots. Analysis of morph frequencies between plots showed significant heterogeneity, with longitudinal stripes more common in grassland and disturbed areas, and spot and bar morphs more common in forests where palm and bromeliad axils are important habitat features. Comparison of morph frequencies through time at the same sites showed temporal shifts immediately following Hurricane Hugo in 1989. We suggest that the pattern polymorphism is maintained in part by local habitat matching resulting from selection pressure from visual predators.

Lawrence L. Woolbright
151 Neritina snails responses to channel realignment

This data set includes N. virginea densities and sizes relative to streambed substrate type, water depth, and near-bed water velocity in three sites in a low land segment in Río Mameyes near PR Route 3 bridge: 1) 50 m upstream from bridge, 2) immediately downstream from bridge, and 3) 200 m downstream from bridge (upper Westin Riomar Golfcourse). In addition, above variables are reported for pools and riffles located at PRASA Intake (Río Mameyes) and at La Curvita (Río Espíritu Santo).

Juan Felipe Blanco
152 Canopy Trimming Experiment (CTE) Snail data

The objective of these data is to determine how green litter deposition and canopy opening associated with a hurricane independently and jointly affect population dynamics and community composition of terrestrial gastropods. Because canopy openness can be expected to increase abiotic stress on gastropods, whereas litter deposition should provide increased resources and refugia, tradeoffs can be expected.

Michael R. Willig
153 STREAMS Project: Emergent landscape patterns in stream ecosystem processes resulting from groundwater/surface water interactions

Our primary objective is to understand the linkage between surface-subsurface water interactions and ecosystem processes in neotropical lowland streams over an extended time frame (>25 yrs). Proposed research will occur at La Selva Biological Reserve in Costa Rica, which is owned and operated by the Organization for Tropical Studies

In tectonically active regions of Central America, it is common for solute-rich groundwater to emerge at gradient breaks within the complex volcanic topography of mountains and foothills which intergrade with the coastal plain. These groundwaters can significantly influence solute chemistry and related ecological and ecosystem-level processes in receiving surface waters. Many solute-rich groundwaters are associated with underlying volcanic activity which has altered the chemistry of receiving streams throughout Central America. Geothermally-modified groundwaters, surfacing at the gradient break between the Central Mountain range and the coastal plain at La Selva Biological Station, have high levels of P (up to 400 mg SRP L-1) and other solutes (Ca, Cl, Mg, SO4) but are not elevated in temperature. Spatial patterns in stream solute chemistry are determined by geomorphic features of the volcanic landscape that include: upland lavas drained by P-poor streams; a gradient break (~50 m.a.s.l.), at or near where P-rich springs emerge; and lowland alluvial areas drained by streams that are both P-rich and P-poor depending on whether they receive the input of solute-rich springs.

Our project is the first to determine long-term effects of nutrient enrichment in a detrital-based stream within the wet tropics. We will continue to build upon our ‘long-term' (1988-present) data set on stream solute chemistry, which is the only one that we are aware of for lowland primary rainforest of Central America. The proposed project will build on 18 years of past research which has shown that landscape patterns in stream solute chemistry (resulting from variation in solute-rich groundwater inputs) reflect ecosystem processes such as rates of primary production and decomposition of organic material. Specifically, we are: (1) continuing our evaluation of long-term trends in the solute chemistry of these lowland tropical streams as related to large scale climatic phenomena (e.g., El Nino Southern Oscillation Events); (2) examining how stream segments draining three major geomorphic subfeatures of the lowland tropical landscape respond to temporal (wet versus dry season) changes in precipitation; (3) examining stoichiometric mechanisms behind elevated levels of insect growth and biomass turnover rates in phosphorus-rich streams; and finally (4) concluding (and build upon) an ongoing long-term whole-stream phosphorus enrichment by determining the storage, fate and transport of the artificially-introduced phosphorus (that has been injected over an 8 year period) and examining related effects on detrital foodwebs.

Stream solute chemistry and ecosystem process-oriented data are of fundamental importance to our understanding and management of tropical forests and in predicting effects of regional (and potentially global) environmental change on these threatened ecosystems. Our long-term program will provide new insights into how large scale climatic phenomena interact with subsurface hydrologic factors and geothermal activity to influence stream solute chemistry and related ecosystem processes. We will continue to link the data sets generated from our LTREB Project to those from other long term sites for both tropical (e.g., Luquillo LTER site in Puerto Rico) and temperate research (Coweeta LTER site in North Carolina USA). Finally, the project will contribute to our ongoing environmental outreach program Water for Life, which includes local outreach in communities near La Selva Biological Station and an internationally accessible web page equipped with teaching tools on river conservation and water quality and quantity issues at the high school- level in both Spanish and English.

Catherine Pringle
154 Soil factors predict initial plant colonization on Puerto Rican landslides

Tropical storms are the principal cause of landslides in montane rainforests, such as the Luquillo Experimental Forest (LEF) of Puerto Rico . A storm in 2003 caused 30 new landslides in the LEF that we used to examine prior hypotheses that slope stability and organically enriched soils are prerequisites for plant colonization. We measured slope stability and litterfall in 1 m2 plots 8-13 months following landslide formation. At 13 months we also measured microtopography, soil characteristics (organic matter, particle size, total nitrogen, and water holding capacity), elevation, distance to forest edge, and canopy cover, as well as plant aboveground biomass, plant cover, and root biomass.

155 Canopy Trimming Experiment (CTE) Canopy invertebrate responses to disturbance

Seven tree species were selected to represent early (Cecropia, Prestoea) and late (Dacryodes, Manilkara, Sloanea) successional, and overstory (Cecropia, Dacryodes, Manilkara, Sloanea) and understory (Prestoea, Miconia, Psychotria), species in forests at El Verde. These trees were sampled in all CTE plots.

Timothy D. Schowalter
156 Daily streamflow (Bisley area, 5 stations: Q1, Q2, Q3, Sabana, Puente Roto)

The daily data are summarized to monthly as follows:
Daily average CFS are summed for each month and multiplied by 86400 (seconds per day) to yield cubic feet per month. This value is divided by the particular watershed area and multiplied by another conversion factor to yield cm water equivalent depth discharged by each watershed per month. This allows direct hydrologic comparison of watersheds of different sizes. Time series plots illustrate the biennial periodicity of high and low discharges, and particular floods and droughts. October 1970 was the historic flood for PR, recently exceeded during the passage of Hurricane Hortense in September 1996. The historic drought occurred during 1993-1994 and is clearly visible in these records.

Grizelle Gonzalez
157 Canopy Trimming Experiment (CTE) litterbag invertebrate counts and weights data

Identification, number and dry weight of invertebrates recovered from each litterbag.

158 Physical and chemical attributes of Quebrada Prieta, Bisley 3, Bisley 5, and Toronja related to of shrimp populations measurements

Physical parameters, densities and sizes of two species of freshwater shrimps (Atya lanipes and Xiphocaris elongata) in four headwater streams (Quebrada Prieta, Toronja, Bisley 3 and Bisley 5) have been censused 2 times yearly since 1998 to determine the effects of predatory fishes on shrimp size and spatial distributions of pools relative to locations of waterfalls.