LUQ LTER DATA SETS DOCUMENTATION FORM
ON-LINE VERSION
A DATA SET is a series of observations collected by the same methodology. Each data set should have documentation sufficient for someone unfamiliar with the research to replicate the study. Data sets may be broken into subsets (data files) that are discrete in space and time, in that order. The documentation for a data set should include all spatial and temporal subdivisions of the data.
(Data, Abstract, Methods, Variables)
NOTES:
PERSON(S) COMPLETING THIS FORM: E-MAIL ADDRESS:
| L.L.Woolbright | Lwoolbright@lternet.edu |
| Eda C. Melendez-Colom | emelend@lternet.edu |
PROJECT TITLE: Frog Population Dynamics
PROJECT DESCRIPTION: El Verde Station, located in the tabonuco forest zone on the NW side of the Luquillo Experimental Forest (LEF), has hosted numerous scientific efforts since the 1960s. Thus, a great deal of information exists concerning anuran populations at the site over the past 30 years. Although past surveys did not use consistent techniques, they clearly document the general status of the anuran community of the area. I began working at El Verde in the 1970s and have collected data on the anuran community primarily in the 1980s and 1990s. Until recently, these surveys also lacked a consistent sampling protocol, although they clearly document declines in species richness in comparison to earlier records.
Most Puerto Rican Eleutherodactylus are terrestrial frogs that breed for prolonged periods of time in more or less continuous habitat. Because their life cycle lacks a free living larvae stage, reproductive behavior is not tied to bodies of water and they do not have the large aggregations typical of many aquatic breeders. For these reasons, assessing their population status requires examining fairly large areas of habitat. I began systematically sampling the anuran community on a 12 ha grid at the Bisley watersheds in 1989 and a second 16 ha grid at El Verde in 1993. These efforts have provided a comprehensive data set that can be used to evaluate future changes in the anuran community in this forest.
LTER CORE AREAS:(Annotate all that apply)
|
Population Dynamics |
LEF LTER 1 RESEARCH TOPIC: (Annotate all that apply)
|
Spatial and Temporal Distribution of Populations |
We define a data file as
a component of a data set. A data set can have only one data file or more. Basically,
different data files have different data structures or format.
DATA SET FILES (SUBSETS):
|
Data File No. |
Data File Identifier |
On-Line Filename |
Starting Date |
Periodicity of sample |
End Period |
|
1 |
El Verde Grid Point 1991 Coqui Survey |
July 4, 1991 |
biyearly
|
August 9, 1991 |
|
2 |
El Verde Grid Point 1992 Coqui Survey | July 12, 1991 |
Summer |
July 17, 1991 |
|
3 |
El Verde Grid Point 1993 Coqui Survey | May 26, 1993
|
Summer |
May 30, 1993 |
|
|
4 |
Bisley Grid Point 1988 Coqui Survey |
March 1, 1988 | once | March 1, 1988 |
RESEARCH LOCATION: El Verde Grids: North of El Verde Field Station past
the Sonandora River
Bisley Grids: at the Bisley Experimental Watersheds of the Luquillo Experimental
Forest (LEF) of Puerto Rico. The Bisley watersheds 1 and 2 are on the windward
side of the mountains
INVESTIGATORS:
| PRINCIPAL INVESTIGATORS | E-MAIL address |
| Larry Woolbright | LWoolbright@siena.edu |
| OTHER RESEARCHERS | E-MAIL address |
| Students |
| CONTACT PERSONS | E-MAIL address | Phone Number (Include area code) |
| Larry Woolbright | LWoolbright@siena.edu | (518) 783-2440 |
DATA SET ABSTRACT: Count of frogs, various frog predators, and various frog preys were taken at regular intervals on the grids.
DATA SET METHODS: A 5m X 5m quadrant was established at certain grid points. Adult E. coqui were cohort marked by toc clip and measured with dial calipers to 0.5mm. Sex and reproductive condition were noted.
Juvenile coquies upto 5mm size classes were measured using a plastic rule and counted. Other frog species were sampled by listening for call and estimating the number of calling individuals within 20m of the grid point. Known invertebrate frog predators and major preys were identified by morphospecies and counted.
All data were taken between 2000m and 0200mm. Foliage and litter moisture, Rh sling psychoro, and SPL were taken inmediately before each quadrant was measured.
REFERENCES: None
CROSS-REFERENCES (other data sets related to this one): LTERDBAS25: Frog transect data, LTERDBAS30: Frog grid data (Bisley), LTERDBAS44: Frog population plots (El Verde + Bisley), LTERDBAS45: Frog spatial distribution data (El Verde + Bisley), LTERDBAS76: Frog abundance in fertilization plots, LTERDBAS150: Pattern morphology for frogs captured at 9 locations in northeastern Puerto Rico over a 25-year period from 1978 to 2002
SAMPLE LOCATION: N/A
STORAGE SITES (of data files):
INVESTIGATOR'S ASSIGNED KEYWORDS: Amphibia, Ancura, leptodactylidae, eleutherodactylus coqui, habitat selection, density, Arthropoda, Insect, Arachnida.
LEF LTER OFFICIAL KEYWORDS (See table): LFDP (EV Big Grid), BISLEY WATERSHEDS, Q1, Q2, TABONUCO, POPULATION DYNAMICS, AMPHIBIANS, PEER REVIEWED JOURNAL
PUBLICATIONS:
Stewart, M.M. and L.L. Woolbright. 1996. Amphibians. Chapter 8 in D.P. Reagan
and R.B. Waide, editors. The food web of a tropical rain forest. University
of Chicago Press, Chicago, Illinois. (Abstract)
Gonser, R.A.* and L.L. Woolbright. 1995. Homing behavior of the Puerto Rican frog, Eleutherodactylus coqui. Journal of Herpetology 29:481-484. (Abstract)
Woolbright, L.L. 1996. Disturbance influences long-term population patterns in the Puerto Rican frog, (1)Eleutherodactylus coqui (Anura: Leptodactylidae). 1996. Biotropica 28:493-501. (Abstract)
DISSEMINATION: UNRESTRICTED
REASONS TO RESTRICT DATA IN THIS DATA SET BEYOND ITS TWO YEAR POLICY PERIOD*:
*WILL HAVE TO BE APPROVED BY LTER PRINCIPAL INVESTIGATORS: J. ZIMMERMAN, A. LUGO , D.J. LODGE
SITES DESCRIPTIONS: El Verde Grid: Grids are 20 m by 20 m plots (quadrats) in the Big Grid. See LTERDBAS # 47 for further description. The Bisley watersheds 1 and 2 are on the windward side of the mountains, have a mean annual precipitation of approximately 3500 mm, and occur in the subtropical forest life zone (Scatena, 1989).
Geographical positional system (GPS) Coordinates for each location:
| location | latitude | longitude |
| El Verde Grids | 18° 19 26' North |
65° 49 3' West |
| Bisley Grids |
VARIABLES (ATTRIBUTES):
|
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 | 1-4 | 1-4 | 1-3 | 1-4 | 1-3 |
|
ABBREVIATION (as it appears on the data file) |
RecordDataLabel | GridPointRow |
GridPointColumn |
GridPointSubGrid | Date |
Time |
|
NAME OF VARIABLE |
Visit day or Totals | grid row coordinate | grid column coordinate | Sub Grid number | Date |
Time |
|
DEFINITION OF VARIABLE |
Label assigned to designate the day in which the observations were taken or that the record (row) of data displays totals of a specific group of individuals observed, when applicable | x coordinates of the 40 X 40 at Bisley (120, 160, 200, 240, 280, 320, 360) or the 16 X 25 grid at El Verde (3, 6, 9, 12, 15) where observation was performed | y coordinates of the 40 X 40 at Bisley (400, 440, 480, 520, 560, 600, 640) or the 16 X 25 grid at El Verde (3, 6, 9, 12, 15, 18, 21, 24) where observation was performed |
The 5m X 5m subquadrat designation of the 400 quadrats of the El Verde Grid where observation was performed | Date of measurement |
Time of measurement. Original data type is integer. |
|
UNIT |
||||||
|
PRECISION |
||||||
|
RANGE OR LIST OF VALUES |
First Night Data = total of frogs or predator of a particular type observed in the first night the grid point was visited, Second Night Data = total of frogs or predator of a particular type observed in the second night the grid point was visited, Third Night Data = total of frogs or predator of a particular type of a particular kind observed in the third night the grid point was visited, Total = total of frogs or predator of a particular type observed in all three nights. | 120, 160, 200, 240, 280, 320, 360, 3, 6, 9, 12, 15 | 400, 440, 480, 520, 560, 600, 640, 3, 6, 9, 12, 15, 18, 21, 24 | 37, 40, 43, 46, 49, 88, 91, 94, 97, 100, 139, 142, 145, 148, 151, 190, 193, 196, 199, 202, 241, 244, 247, 250, 253, 292, 295, 298, 301, 304, 343, 346, 349, 352, 355, 394, 397, 400, 403, 406 | ||
|
DATA TYPE |
alphabetic | integer | integer | integer | datetime |
datetime |
|
MISSING DATA CODES |
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
ABBREVIATION (as it appears on the data file) |
GridPointSPL | GridPointRh | GridPointFoliage | GridPointLitter | Otherfrognumber |
Otherfrogspp |
NAME OF VARIABLE |
Sound pressure level |
Relative Humidity |
Foliage moisture |
Litter moisture |
Other frog number |
Other frog species |
DEFINITION OF VARIABLE |
Minimum SPL reding on realistic SPL meter set to slow response and C weighting. Sound is metered for 30 seconds in each of 4 directions . Then the 4 minima are average. |
Wet and dry bulb reading off a sling psychrometer (can be converted to %Rh with standard tables) |
Description of availability of liquid water on foliage surfaces |
Description of water content of leaf litter in forest floor |
Number of calling males of other species of frogs besides E. coqui that were heard calling in an estimated area of 20m around the grid point. |
Species of calling males of other species of frogs besides E. coqui that were heard calling in an estimated area of 20m around the grid point. |
UNIT |
Decibel |
Fahrenheit |
||||
PRECISION |
0.5 |
.2 |
||||
RANGE OR LIST OF VALUES |
<60, 60-69 |
72-78 |
Wet, spotted, dry |
Wet, damp, dry |
|
|
DATA TYPE |
alphanumeric |
alphanumeric |
alphabetic |
alphabetic |
alphanumeric |
alphanumeric |
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
|
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
|
ABBREVIATION (as it appears on the data file) |
Adultcoquies_sex | Adultcoquies_cond | Adultcoquies_size | Juvenile6-10 | Juvenile11-15 | Juvenile16-20_Anolis_gun |
|
NAME OF VARIABLE |
Adult coqui sex |
Adult coqui condition |
Adult coqui size |
Number of juvenile coquies in size class 6 - 10 mm |
Number of juvenile coquies in size class 11-15mm |
Number of juvenile juvenile Anolis gundlachi coquies in size class 16-20 mm |
|
DEFINITION OF VARIABLE |
Codes the sex of each of the adult frogs observed in the grid point |
Codes the reproductive status of each of the adult frogs observed in the grid point |
Codes the body size (snout to vent length - SVL) of each of the adult frogs observed in the grid point |
Number of juvenile coquies that measure from 6 to 10 mm in length observed in the grid point in a particular visit |
Number of juvenile coquies that measure from 11 to 15 mm in length observed in the grid point in a particular visit |
Number of Anolis gundlachi juvenile coquies that measure from 16 to 20 mm in length observed in the grid point in a particular visit |
|
UNIT |
millimeter | |||||
|
PRECISION |
||||||
|
RANGE OR LIST OF VALUES |
M = male, F = female |
1 = sex not evident, |
|
0, ... |
0, ... |
0, ... |
|
DATA TYPE |
alphabetic |
alphanumeric |
alphanumeric |
integer |
integer |
integer |
|
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
ABBREVIATION (as it appears on the data file) |
Juvenile21-25 | JuvenileTotal | PredatorsPhrynus | Predatorstarantula | Predatorsscorpion | Predatorsstassina |
NAME OF VARIABLE |
Number of juvenile coquies in size class 21 - 25 mm |
Total number of juvenile coquies |
Number of Phrynus predators |
Number of tarantula predators |
Number of scorpion predators |
Number of stassina predators |
DEFINITION OF VARIABLE |
Number of juvenile coquies that measure from 21 to 25 mm in length observed in the grid point in a particular visit |
Total number of juvenile coquies in all size classes observed in the grid point in a particular visit |
Counts of all Phrynus invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts of all tarantula invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts of all scorpion invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts of all stassina invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
UNIT |
number | number | number | number | number | number |
PRECISION |
||||||
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
DATA TYPE |
integer |
integer |
integer |
integer |
integer |
integer |
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
ABBREVIATION (as it appears on the data file) |
Predatorslandcrab | Predatorswolfspider | Predatorsother_list | PredatorsTotal | Preycockroach |
NAME OF VARIABLE |
Number of landcrab predators |
Number of wolfspider predators |
List or number of other predators |
Number of all predators |
Number of cockroach preying on frog |
DEFINITION OF VARIABLE |
Counts of all landcrab invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts of all wolfspider invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
List or counts of all other invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts of all invertebrates known or suspected to prey on E. coqui in the grid point in a particular visit |
Counts the number of cockroaches preying on coqui that occur an foliage and litter surfaces |
UNIT |
number | number | number | number | number |
PRECISION |
|||||
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
DATA TYPE |
integer |
integer |
integer |
integer |
integer |
MISSING DATA CODES |
|
|
|
VARIABLES (ATTRIBUTES):
|
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
1-3 |
|
ABBREVIATION (as it appears on the data file) |
Preyredroach | Preycricket | Preycavecricket | Preyredcricket |
Preyother_list |
Preytigercriket |
Preyblackbug |
|
NAME OF VARIABLE |
Number of edroach preying on frog |
Number of crickets preying on frog |
Number of cavecrickets preying on frog |
Number of redcrickets preying on frog |
List or number of other invertebrates preying on frog |
Number of tigercrikets preying on frog |
Number of blackbugs preying on frog |
|
DEFINITION OF VARIABLE |
Counts the number of edroaches preying on coqui that occur an foliage and litter surfaces |
Counts the number of crickets preying on coqui that occur an foliage and litter surfaces |
Counts the number of cavecrickets preying on coqui that occur an foliage and litter surfaces |
Counts the number of redcrickets preying on coqui that occur an foliage and litter surfaces |
List or counts of the number of other invertebrates preying on coqui that occur an foliage and litter surfaces |
Counts the number of tigercrikets preying on coqui that occur an foliage and litter surfaces |
Counts the number of blackbugs preying on coqui that occur an foliage and litter surfaces |
|
UNIT |
number | number | number | number | number | number | number |
|
PRECISION |
|||||||
|
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
|
DATA TYPE |
integer |
integer |
integer |
integer |
integer |
integer |
integer |
|
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
1-3 |
1-3 |
1-3 |
1-3 |
4 |
4 |
ABBREVIATION (as it appears on the data file) |
Preybrownbug |
Preybrownroach | Preygreencricket |
PreyTotal |
Cc |
Nt |
NAME OF VARIABLE |
Number of brownbugs preying on frog |
Number of brownroaches preying on frog |
Number of greencrickets preying on frog |
Total number of invertebrates preying on frog |
Number of Caracolla caracollus frogs in plot | Number of Nenia tridens frogs in plot |
DEFINITION OF VARIABLE |
Counts the number of brownbugs preying on coqui that occur an foliage and litter surfaces |
Counts the number of brownroaches preying on coqui that occur an foliage and litter surfaces |
Counts the number of greencrickets preying on coqui that occur an foliage and litter surfaces |
Sum of all the number of invertebrates preying on coqui that occur an foliage and litter surfaces |
Number of individual of Caracolla caracollus counted in the plot | Number of individual of Nenia tridens counted in the plot |
UNIT |
number | number | number | number | number | number |
PRECISION |
||||||
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
DATA TYPE |
integer |
integer |
integer |
integer |
integer |
integer |
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
4 |
4 |
4 |
4 |
4 |
4 |
ABBREVIATION (as it appears on the data file) |
Lp | Ai | Pa | Og | Da | Py |
NAME OF VARIABLE |
Number of Lamponius portoricensis frogs in plot | Number of Agememnon ifemedia frogs in plot | Number of Polidontes acutangula frogs in plot | Number of Oleacina glabra frogs in plot | Number of D a frogs in plot | Number of Pseudobacteria yersiniana frogs in plot |
DEFINITION OF VARIABLE |
Number of individual of Lamponius portoricensis counted in the plot | Number of individual of Agememnon ifemedia counted in the plot | Number of individual of Polidontes acutangula counted in the plot | Number of individual of Oleacina glabra counted in the plot | Number of individual of D a counted in the plot | Number of individual of Pseudobacteria yersiniana counted in the plot |
UNIT |
number | number | number | number | number | number |
PRECISION |
||||||
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
0, ... |
DATA TYPE |
integer |
integer |
integer |
integer |
integer |
integer |
MISSING DATA CODES |
|
|
|
|
VARIABLES (ATTRIBUTES):
FILE NAME OR #ABOVE (all in which the variable appears) |
4 |
4 |
4 |
4 |
ABBREVIATION (as it appears on the data file) |
As | Gn | Aa |
Cm |
NAME OF VARIABLE |
Number of Alcadia striata frogs in plot | Number of Garotis nigrolineata frogs in plot | Number of Alcadia alta frogs in plot | Number of Caracolla morginella frogs in plot |
DEFINITION OF VARIABLE |
Number of individual of Alcadia striata counted in the plot | Number of individual of Garotis nigrolineata counted in the plot | Number of individual of Alcadia alta counted in the plot | Number of individual of Caracolla morginella counted in the plot |
UNIT |
number | number | number | number |
PRECISION |
||||
RANGE OR LIST OF VALUES |
0, ... |
0, ... |
0, ... |
0, ... |
DATA TYPE |
integer |
integer |
integer |
integer |
MISSING DATA CODES |
COMPUTATIONAL METHODS:
| Variable Name | Formula |
|
|
|
Observation: Wet and dry bulb temperatures can be converted to % RN with standard tables.
FOR DATA MANAGER USE ONLY
DATE OF LAST REVIEW:
August 26, 2008
DATE OF LAST ENTRY: 1993
STAGE OF DATA SET MANAGEMENT (dates) :
RECEIVED ENTERED: 1993
FILED 1993 ON-LINE 2001
REVIEWED BY RESEARCHER
FILING MEDIA:
NAME OF DOCUMENTATION FILE: lterdb45.doc,htm
NAME OF ON - LINE CATALOG: LTERDBAS
RECORD #: 45
DOCUMENT TYPE: paper (magnetic media also)
PRIORITY TO BE ENTERED: N/A
Rev. date of this form: 25 January 2001